basic_demon_example.m

compile_c_files.m

functions\backwards2forwards.m

.........\backwards2forwards_2d_double.c

.........\backwards2forwards_2d_double.m

.........\backwards2forwards_3d_double.c

.........\backwards2forwards_3d_single.c

.........\demons_energy.m

.........\fminlbfgs.m

.........\imgaussian.m

.........\imresize3d.m

.........\MutualTransform.m

.........\mutual_histogram_double.c

.........\mutual_histogram_double.m

.........\mutual_histogram_single.c

.........\mutual_transform_2d_double.asv

.........\mutual_transform_2d_double.c

.........\mutual_transform_2d_double.m

.........\mutual_transform_3d_double.asv

.........\mutual_transform_3d_double.c

.........\mutual_transform_3d_single.asv

.........\mutual_transform_3d_single.c

.........\showcs3.fig

.........\showcs3.m

.........\store_transf.m

.........\strain.m

........._affine\affine_error_3d_double.c

................\affine_error_3d_single.c

................\affine_registration_error.m

................\affine_registration_image.m

................\affine_transform.m

................\affine_transform_2d_double.c

................\affine_transform_2d_double.m

................\affine_transform_3d_double.c

................\affine_transform_3d_single.c

................\image_difference.m

................\image_interpolation.c

................\image_interpolation.h

................\make_transformation_matrix.m

................\squared_difference_double.c

................\squared_difference_double.m

................\squared_difference_single.c

..........nonrigid\image_interpolation.c

..................\image_interpolation.h

..................\movepixels.m

..................\movepixels_2d_double.c

..................\movepixels_2d_double.m

..................\movepixels_3d_double.c

..................\movepixels_3d_single.c

images\brain_FA.png

......\brain_FLAIR.png

......\brain_MD.png

......\brain_T1.png

......\brain_T1_wave.png

......\brain_T2.png

......\brain_T2_wave.png

......\checkboard2.png

......\checkboard3.png

......\checkboard4.png

......\get_example_data.m

......\lenag1.png

......\lenag2.png

......\lenag3.png

......\modtest1.png

......\modtest2.png

......\modtest3.png

......\wave_field.mat

literature\Kroon_Paper_Boston.pdf

..........\Kroon_Poster_Boston.pdf

register_images.m

register_volumes.m

license.txt