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Searching for shared motif between strings in C-
Searching for shared motif between strings in C
Amir Mohammad Nasrollahi, 30 Jan 2015 CPOL
4.50 (2 votes)
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In this article, i consider the problem of identifying motifs in the biological sequence data sets. To solve this task, i present a new algorithm for finding patterns that just use <String.h> library in C compiler and a new way to avoid using arrays search.
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Introduction
In this article, i consider the problem of identifying motifs in the biological sequence data sets. To solve this task, i present a new algorithm for finding patterns that just use <String.h> library in C compiler and a new way to avoid using arrays search.
Background
Finding motifs or repeated patterns in data is of wide scientific interest with many applications in genomic and proteomic analysis. The motif search problem abstracts many important problems in analysis of sequence data, where motifs are, for ins
Searching for shared motif between strings in C
Amir Mohammad Nasrollahi, 30 Jan 2015 CPOL
4.50 (2 votes)
Rate:
vote 1vote 2vote 3vote 4vote 5
In this article, i consider the problem of identifying motifs in the biological sequence data sets. To solve this task, i present a new algorithm for finding patterns that just use <String.h> library in C compiler and a new way to avoid using arrays search.
Download source
Download exe.zip
Introduction
In this article, i consider the problem of identifying motifs in the biological sequence data sets. To solve this task, i present a new algorithm for finding patterns that just use <String.h> library in C compiler and a new way to avoid using arrays search.
Background
Finding motifs or repeated patterns in data is of wide scientific interest with many applications in genomic and proteomic analysis. The motif search problem abstracts many important problems in analysis of sequence data, where motifs are, for ins
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Project1.dev
Project1.exe
main.c
main.o
Makefile.win