nonrigid_version21b\angle1.asv

...................\angle1.m

...................\boneimage1.PNG

...................\boneimage1a.PNG

...................\boneimg1.png

...................\boneimg2.png

...................\boneimg3.png

...................\boneimg4.png

...................\boneimg5.png

...................\boneimg6.png

...................\boneimg7.png

...................\boneimg8.png

...................\boneimg9.png

...................\compile_c_files.m

...................\deform.tif

...................\example.asv

...................\functions\backwards2forwards.m

...................\.........\backwards2forwards_2d_double.c

...................\.........\backwards2forwards_2d_double.m

...................\.........\backwards2forwards_3d_double.c

...................\.........\backwards2forwards_3d_single.c

...................\.........\fminlbfgs.m

...................\.........\image_difference.m

...................\.........\imgaussian.c

...................\.........\imgaussian.m

...................\.........\imresize3d.m

...................\.........\inversegrid.m

...................\.........\make_grid_image.m

...................\.........\make_init_grid.m

...................\.........\maple_penalties_smoothing_2d.mw

...................\.........\maple_penalties_smoothing_3d.mw

...................\.........\maxNumCompThreads.c

...................\.........\maxNumCompThreads.m

...................\.........\mutual_histogram_double.c

...................\.........\mutual_histogram_double.m

...................\.........\mutual_histogram_single.c

...................\.........\penalties_smoothness.m

...................\.........\penalty_matrix.mat

...................\.........\refine_grid.m

...................\.........\showcs3.fig

...................\.........\showcs3.m

...................\.........\squared_difference_double.c

...................\.........\squared_difference_double.m

...................\.........\squared_difference_single.c

...................\.........\strain.m

...................\functions

...................\........._affine\affine_error_3d_double.c

...................\................\affine_error_3d_single.c

...................\................\affine_parameter_scaling.m

...................\................\affine_registration_error.m

...................\................\affine_registration_image.m

...................\................\affine_transform.m

...................\................\affine_transform_2d_double.c

...................\................\affine_transform_2d_double.m

...................\................\affine_transform_3d_double.c

...................\................\affine_transform_3d_single.c

...................\................\image_interpolation.c

...................\................\image_interpolation.h

...................\................\make_transformation_matrix.m

...................\functions_affine

...................\..........nonrigid\bspline_coefficients.m

...................\..................\bspline_error_2d_double.c

...................\..................\bspline_error_3d_double.c

...................\..................\bspline_error_3d_single.c

...................\..................\bspline_grid_fitting.m

...................\..................\bspline_registration_gradient.m

...................\..................\bspline_registration_image.m

...................\..................\bspline_transform.m

...................\..................\bspline_transform_2d_double.c

...................\..................\bspline_transform_2d_double.m

...................\..................\bspline_transform_3d_double.c

...................\..................\bspline_transform_3d_single.c

...................\..................\bspline_trans_points_double.m

...................\..................\image_interpolation.c

...................\..................\image_interpolation.h

...................\..................\image_interpolation.m

...................\..................\movepixels.m

...................\..................\movepixels_2d_double.c

...................\............