basic_demon_example.m

compile_c_files.m

functions\backwards2forwards.m

functions\backwards2forwards_2d_double.c

functions\backwards2forwards_2d_double.m

functions\backwards2forwards_3d_double.c

functions\backwards2forwards_3d_single.c

functions\demons_energy.m

functions\fminlbfgs.m

functions\imgaussian.m

functions\imresize3d.m

functions\MutualTransform.m

functions\mutual_histogram_double.c

functions\mutual_histogram_double.m

functions\mutual_histogram_single.c

functions\mutual_transform_2d_double.asv

functions\mutual_transform_2d_double.c

functions\mutual_transform_2d_double.m

functions\mutual_transform_3d_double.asv

functions\mutual_transform_3d_double.c

functions\mutual_transform_3d_single.asv

functions\mutual_transform_3d_single.c

functions\showcs3.fig

functions\showcs3.m

functions\store_transf.m

functions\strain.m

functions_affine\affine_error_3d_double.c

functions_affine\affine_error_3d_single.c

functions_affine\affine_registration_error.m

functions_affine\affine_registration_image.m

functions_affine\affine_transform.m

functions_affine\affine_transform_2d_double.c

functions_affine\affine_transform_2d_double.m

functions_affine\affine_transform_3d_double.c

functions_affine\affine_transform_3d_single.c

functions_affine\image_difference.m

functions_affine\image_interpolation.c

functions_affine\image_interpolation.h

functions_affine\make_transformation_matrix.m

functions_affine\squared_difference_double.c

functions_affine\squared_difference_double.m

functions_affine\squared_difference_single.c

functions_nonrigid\image_interpolation.c

functions_nonrigid\image_interpolation.h

functions_nonrigid\movepixels.m

functions_nonrigid\movepixels_2d_double.c

functions_nonrigid\movepixels_2d_double.m

functions_nonrigid\movepixels_3d_double.c

functions_nonrigid\movepixels_3d_single.c

images\brain_FA.png

images\brain_FLAIR.png

images\brain_MD.png

images\brain_T1.png

images\brain_T1_wave.png

images\brain_T2.png

images\brain_T2_wave.png

images\checkboard2.png

images\checkboard3.png

images\checkboard4.png

images\get_example_data.m

images\lenag1.png

images\lenag2.png

images\lenag3.png

images\modtest1.png

images\modtest2.png

images\modtest3.png

images\wave_field.mat

literature\Kroon_Paper_Boston.pdf

literature\Kroon_Poster_Boston.pdf

register_images.m

register_volumes.m

license.txt