搜索资源列表
calculate_R_matrix
- use the HeatS+ProbS hybrid algorithm introduced by Zhou et al. [74] on the two bipartite networks to determine the edge weight in both miRNA projections. By which, the resource transfer process, as one of the weighting m
known_lincRNA
- 主要用于已知lncRNA的分析，从gff文件中查找已知的lncRNA，并从中找到它的序列和外显子个数，长度分布信息(known lncRNA prediction)
lncRNA_antisen_target
- 用来做lncRNA的靶基因预测，利用自由能结合最小值预测，并对预测结果做简化处理(lncRNA target prediction)
cis_tar
- 查找lncRNA附近的基因，lncRNA上下游10kb到100kb内的基因(search lncRNA nearby gene)
lncRNA_prediction
- 未知的新的lncRNA的预测，并将未知的lncRNA的特征图形化展示(novel lncRNA prediction)
PhyloCSF
- lncRNA的保守性分析，主要用来进行lncRNA的保守性评估(lncRNA coservation analysis)
dsec-all-ncRNA-r1.3.fasta
- blast比对,ncRNA,lncRNA,可以比对lnc(blast alignment,ncRNA,lncRNA,may can align lnc)