文件名称:MSCluster
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MS-Clustering is designed to rapidly cluster large MS/MS datasets. The program merges similar spectra (having similar m/z values ?within a given tolerance), and creates a single consensus spectrum as a representative. The input formats accepted are: dta, mgf, mzXML. The output format is mgf.
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下载文件列表
压缩包 : 45666019mscluster.rar 列表 MSCluster.exe Models\All_PTMs.txt Models\CID_IT_TRYP.txt Models\CID_IT_TRYP_break_score.txt Models\CID_IT_TRYP_config.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_1_0_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_1_0_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_1_0_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_1_1_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_1_1_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_1_1_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_1_2_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_1_2_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_1_2_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_0_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_0_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_0_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_1_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_1_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_1_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_2_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_2_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_2_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_3_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_3_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_3_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_4_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_4_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_4_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_5_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_5_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_2_5_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_0_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_0_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_0_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_1_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_1_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_1_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_2_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_2_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_2_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_3_0.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_3_1.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_3_3_2.txt Models\CID_IT_TRYP_EDGE\CID_IT_TRYP_edge_model.txt Models\CID_IT_TRYP_EDGE Models\CID_IT_TRYP_fragments.txt Models\CID_IT_TRYP_fragment_sets.txt Models\CID_IT_TRYP_PMCR.txt Models\CID_IT_TRYP_SQS.txt Models\LTQ_COMP\IT_TRYP_end_freq_1.txt Models\LTQ_COMP\IT_TRYP_end_freq_2.txt Models\LTQ_COMP\IT_TRYP_end_freq_3.txt Models\LTQ_COMP\IT_TRYP_mid_freq_1.txt Models\LTQ_COMP\IT_TRYP_mid_freq_2.txt Models\LTQ_COMP\IT_TRYP_mid_freq_3.txt Models\LTQ_COMP\IT_TRYP_start_freq_1.txt Models\LTQ_COMP\IT_TRYP_start_freq_2.txt Models\LTQ_COMP\IT_TRYP_start_freq_3.txt Models\LTQ_COMP Models\PepNovo_PTMs.txt Models src\AdvancedScoreModel.cpp src\AdvancedScoreModel.h src\AdvancedScoreModel_fill.cpp src\AdvancedScoreModel_frag.cpp src\AdvancedScoreModel_regional.cpp src\AnnotatedSpectrum.h src\AnnotatedSpecturm.cpp src\auxfun.cpp src\auxfun.h src\base64.cpp src\base64.h src\BasicDataStructs.cpp src\BasicDataStructs.h src\cluster_main.cpp src\Config.cpp src\Config.h src\ConversionTables.cpp src\ConversionTables.h src\DeNovoDp.cpp src\DeNovoDp.h src\DeNovoPartModel.cpp src\DeNovoRankModel.h src\DeNovoRankScore.cpp src\DeNovoRankScore.h src\DeNovoRankTrain.cpp src\DeNovoSolutions.cpp src\DeNovoSolutions.h src\DiscretePeakModel.cpp src\DiscretePeakModel.h src\EdgeModel.cpp src\EdgeModel.h src\FileManagement.cpp src\FileManagement.h src\Fragmentation.cpp src\Fragmentation.h src\FragmentSelection.cpp src\FragmentSelection.h src\FragProbTable.cpp src\FragProbTable.h src\Homeomorphic.cpp src\includes.h src\Isotopes.cpp src\Isotopes.h src\Makefile src\MassRangeMap.cpp src\ME_REG.cpp src\ME_REG.h src\ME_Regression_DataSet.cpp src\ME_Regression_Model.cpp src\Model.cpp src\Model.h src\MultiPath.cpp src\MZXML_parsing.cpp src\PartitionModel.cpp src\PeakRankModel.cpp src\PeakRankModel.h src\PeakRankPartialDenovo.cpp src\PeakRank_advanced.cpp src\PeakRank_combined.cpp src\PeakRank_combined_dnv.cpp src\PeakRank_simple.cpp src\PeptideComp.cpp src\PeptideComp.h src\PMCSQS.cpp src\PMCSQS.h src\PMCSQS_model.cpp src\PMC_rank.cpp src\prepare_ScoreTrain_run.pl src\PrmGraph.cpp src\PrmGraph.h src\PTM_stuff.cpp src\QCBasicSpecReader.cpp src\QCDAT.cpp src\QCDotProdSim.cpp src\QCoutputter.cpp src\QCStatics.cpp src\QuickClustering.cpp src\QuickClustering.h src\QuickClusteringSpectra.cpp src\RankBoost.cpp src\RankBoost.h src\RankBoostSample.cpp src\RegionalPepNovoModel.cpp src\RegionalPepNovoModel.h src\RegularRankModel.cpp src\RegularRankModel.h src\ReScoreDB.cpp src\run_ScoreTrain_on_grid.pl src\SiteParseRun.cpp src\Spectrum.cpp src\Spectrum.h src copyright.txt